Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------LLIWSILISFAVGIIMVPIIRKFAFRINAVDTPRERHKHTKTTATLGGLAIFISFSVGMILAPIDKSG-----FLP----IYFGALIIIATG---FIDDIFDLSPKWKM-LGQILAALCVTVWGDITINFINVPFYGQVDFGYFAIPLSIIWIVAIVNALNLIDGLDGLAGGI------SIIALMTIAGMALLLKDVFVAPVALILVAAVAAFLIYNFPPASIFM----GDTGALFLGYMIAVLSLMGFKNVTFISLLVPLIILGVPLSDTFFAIVRRLKERMPISSADRSHIHHRLMALGFTEKQTVLLIYCMALLFSMTGFVFSFSTTWGAMLLLLLLIFSIEIIVE------FIGLIGEDYRPILNLLQKIHRKRK |
| 3TAT Chain:A ((1-397)) | MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQP-HGASLYLPMEGLNCYRHAIAPLLFGA-DHPVLKQQRVA---TIQTLGGSGALKVGADFLKRYF----PESGVWVSDPTWENHVAIFAG-AGFEVSTYPWYDEATN-GVRFNDLLATLKTLP----ARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGL---------PALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRI---LAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS-----------AAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -366429 for 2427 contacts (-151.0/contact) +
2D Compatibility (PS) -31604 + (NN) 6812 + (LL) 2452
1D Compatibility (HY) -400 + (ID) 2200
Total energy: -391369.0 ( -161.26 by residue)
QMean score : 0.230
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