Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYFQEARLIHVELPLIAPFKTSYGELNSKDFYIIELVNEEGIRGY--GELEAFPLPDYTEETLSTAISIVKQHLLPILAQKEIRTPQEINQMFSWIQGNEMAKAAVELAVWDAFAKNEKLSLAKMIGAEKDSIAVGVSIGLQPDAETLVRLVSQYMDEGYERVKLKIAPKKDIQFVKAVREKFPNLSLMADANSAYNREDFWLLKELDHFNLEMIEQPFGAKDFVDHAWLQKKLKTRICLDENIRSLDDLKQAHMLGSCQAVNLKLARVGGMSEALKIAKYCSDNNLLVWCGGMLEAGIGRAHNIALAARAEFTFPGDISASNRYFNKDIVSPAFVLNQGKLTVPTGQGIGVALDLDVLQKYTKSTERILLNKGWS |
| 1XS2 Chain:C ((10-371)) | --IEAAEIVVARLPLK----------THKVVPLL-ILHGEGVQGVAEGTMEARPM--YREETIAGALDLLRGTFLPAILGQTFANPEAVSDALGSYRGNRMARAMVEMAAWDLWARTLGVPLGTLLGGHKEQVEVGVSLGIQADEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPVRATREAFPDIRLTVDANSAYTLADAGRLRQLDEYDLTYIEQPLAWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGGMLESGIGRAHNIHLSTLSNFRLPGDTSSASRYWERDLIQEPLEAVDGLMPVPQGPGTGVTLDREFLATVTEAQE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XS2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250136 for 3114 contacts (-80.3/contact) +
2D Compatibility (PS) -36912 + (NN) -14939 + (LL) 1208
1D Compatibility (HY) -26800 + (ID) 6900
Total energy: -334479.0 ( -107.41 by residue)
QMean score : 0.584
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