Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQILVVDDDRHILKLVGHYLRAEGFHVLEASDGVEAEKIVETEQVHLAVIDVMMPNMDGFELCQKMRASYPDIPVIMLTAKDALADKSRGFEVGTDDYVTKPFEPEELIFRIRALLRRSNQASEVKINIGNITIDQKSYGIKIGNQERMIPVKEFELLYQLASYPGRIFTREELIERIWQRDYDGSDRTVDVHIKRLRDHFDEEKDGIRIVTVRGVGYKLEETR
2ZWM Chain:B ((3-120))
-KKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKY-DMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQ---------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79375 for 950 contacts (-83.6/contact) +
2D Compatibility (PS) -13074 + (NN) -9216 + (LL) 7572
1D Compatibility (HY) -11200 + (ID) 3050
Total energy: -108343.0 ( -114.05 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_2ZWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZWM-query.scw
PDB file :
Tito_Scwrl_2ZWM.pdb
: