Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDLNWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKQVRDLLVYKIDSYDSHIAQFKAGELNADNVEKLWERDKF
1Q06 Chain:B ((1-106))
MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNL--FNDPQ-HSADVKRRTLEKVAEIERHIEELQSMRDQLL--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46310 for 643 contacts (-72.0/contact) +
2D Compatibility (PS) -11451 + (NN) -7782 + (LL) 2312
1D Compatibility (HY) -6000 + (ID) 1700
Total energy: -70931.0 ( -110.31 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_1Q06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q06-query.scw
PDB file :
Tito_Scwrl_1Q06.pdb
: