Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEDVIEVEGVVQETLPNA-MFNVELE-NGHKVLATVSGKIRMHYIRILPGDKVTVELSPYDLTRGRITYRFK
1FR3 Chain:A ((3-62))
--ISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVA-DLDLVPGDKVTALVKATE-----------
General information:
TITO was launched using:
RESULT:
Template:
1FR3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21213 for 319 contacts (-66.5/contact) +
2D Compatibility (PS) -6090 + (NN) 628 + (LL) 1296
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -27979.0 ( -87.71 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_1FR3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FR3-query.scw
PDB file :
Tito_Scwrl_1FR3.pdb
: