Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIRFFKIVTPILLSISLVACSSASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES--KKTDVLIISGDLTNNGEKTSHEELAKKLTQVE-KNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYGDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV---------------FPHKYGNITYSAKNKNFTYQSQKLDMEAWAKAQGSTDENLLNFDQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTMGLNNMYFFAGTAPPKSDGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP |
| 3IB7 Chain:A ((21-279)) | ----------------------------------HPRPDYVLLHISDTHLIGGDRRLYG--------------AVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRK----------------FLLDEAPS----------MAPLDRVCMI-DGLRIIVLDTSVPGH--------HHGEIRASQLGWLAEELATPA--PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATF-----VGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPD--TVVHSVIPLG-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94769 for 2043 contacts (-46.4/contact) +
2D Compatibility (PS) -26069 + (NN) -7597 + (LL) 9264
1D Compatibility (HY) -9600 + (ID) 2050
Total energy: -130821.0 ( -64.03 by residue)
QMean score : 0.391
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