Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLDKELVNLHGSAKNADEAIVQAGELLVNAGYVSEQYVEKMVES-YHENGAYFVIAPQIAIPHARPTDGVENSAVSLVVLKDGVNFGHAANDPVRLVFGLAATSSEAHLKVIQKIVSLLSNNDNIEKMIHSEDYQAIGELVEG
3OXP Chain:A ((7-149))
-TLLTSDVIQVVSQAKDWRDAIAISCQPLIDNGAVEARYVEAIYRSHEAIGPYY-VVGPGIAMPHARPEDGVNRLSLALTVITEGVTFNAEGNDPVKLLIVLAATDSNSHIEAISQLAQLFDTASDVQALLNAKTPQDILSVIAR
General information:
TITO was launched using:
RESULT:
Template:
3OXP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102077 for 1100 contacts (-92.8/contact) +
2D Compatibility (PS) -15726 + (NN) -10222 + (LL) 340
1D Compatibility (HY) -13200 + (ID) 2250
Total energy: -143135.0 ( -130.12 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_3OXP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OXP-query.scw
PDB file :
Tito_Scwrl_3OXP.pdb
: