Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRSNKFGRKKNKKIGKLHKSYDAY-------LMELIEVTQE---NWHKQKVLMRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
1D8J Chain:A ((1-81))
ALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLMTEALVNNPKIEVIDGK------YAFKPKYNVR----
General information:
TITO was launched using:
RESULT:
Template:
1D8J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 18059 for 414 contacts (43.6/contact) +
2D Compatibility (PS) -7460 + (NN) -3751 + (LL) 940
1D Compatibility (HY) -3200 + (ID) 850
Total energy: 3738.0 ( 9.03 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_1D8J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D8J-query.scw
PDB file :
Tito_Scwrl_1D8J.pdb
: