Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIE-FDEAFNENLKGVSRIDSLLLILRKDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACRGLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKSTGLLDLRILEILHSK
1Z4N Chain:B ((2-189))
----FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKIL--DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPG------------IKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z4N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94924 for 1427 contacts (-66.5/contact) +
2D Compatibility (PS) -18895 + (NN) -10028 + (LL) 3764
1D Compatibility (HY) -16000 + (ID) 4450
Total energy: -140533.0 ( -98.48 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_1Z4N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z4N-query.scw
PDB file :
Tito_Scwrl_1Z4N.pdb
: