Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIAVFASANGSNFQVIAE-------QFPVSFVFSDHRDAYVLERAQNLAIPSFAFELKEFENKAAYEQAVVDLLDKHEIDLVCLAGYMKIVGETLLSAYEGRIINIHPTYLPEFPGAHGIKDAWEAGVDQSGVTIHWVDSGVDTGQVIQQVHVPRLADDSLESFETRIHETEYQLYPAVLDSLGIKRK
1JKX Chain:D ((1-181))
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRL
General information:
TITO was launched using:
RESULT:
Template:
1JKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134049 for 1347 contacts (-99.5/contact) +
2D Compatibility (PS) -19278 + (NN) -10518 + (LL) 0
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -181145.0 ( -134.48 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_1JKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JKX-query.scw
PDB file :
Tito_Scwrl_1JKX.pdb
: