Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLVKNLEIVESIFGDWDETIIWSCVQGIMGEVFVDSLDQPKSSLAKLGRKSSFGFLAGQPTLFLLEVCSGEDIILVPQHKGWSDLIESTYGQNAHSFKRYATKKDTLFERSRLEKFVTQLPNGFELRAIDEKVYNSCLEK---EWSQDLVANYA-TYQYYKK--QGIGYVVYYQGNIIAGASSYSTY--------KNGIE-IEVDTHPDFRRRGLATIVAAQLILTCLDKGIYPSWDAH---TRTSLNLSEKLGYEFSHEYIAYEID |
| 1S3Z Chain:A ((19-163)) | --------------------------------------------------------------------------------------------------------------------------SHMDIRQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEETERVIFYRKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53617 for 837 contacts (-64.1/contact) +
2D Compatibility (PS) -13179 + (NN) -4707 + (LL) 8404
1D Compatibility (HY) 0 + (ID) 1000
Total energy: -64099.0 ( -76.58 by residue)
QMean score : 0.520
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