Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRTVAIDIGGTMIKHGIVDNLGCIVEASELATEAYKGGPGILQKVCQIIDNYLTEGSIDGIAISSAGMVDPDEGCIFYSGPQIPNYAGTQFKKVLEDTYQVRTEIENDVNCAGLAEAVSGSAKDSSIALCLTIGTGIGGCLIIDKTVFHGFSNSACEVGYMHLSD----------GDFQDLASTTALIADVAKAHGDEI--------------SRWDGRRIFQEAKEGNEKCIASIDRMINYLGQGIANMVYVVNPEKVVLGGGIMAQKDYLQDKLSESLKRNLVTS-LAEKTAIVFAQHENQAGMLGAYYHFKNRG |
| 3VGL Chain:A ((2-313)) | -GLTIGVDIGGTKIAAGVVDEEGRILSTFKVATPP--TAEGIVDAICAAVAGASEGHDVEAVGIGAAGYVDDKRATVLFA-PNI-DWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200209 for 2723 contacts (-73.5/contact) +
2D Compatibility (PS) -30512 + (NN) -10127 + (LL) -120
1D Compatibility (HY) -16400 + (ID) 3650
Total energy: -261018.0 ( -95.86 by residue)
QMean score : 0.479
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