Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASGEKAKIQRKKSGAWSMTYKTLDGNVVATFRPMFKKTGSHCYISTSKMTKSDGNNNFSIQIYYKGTSNVKIKMFDDNPEHTMQFSKKKFANNMLNRDESTTNHSYDKVLEGDLTPFMGQFSSDSFNQTIVDSGMTYGGYEPKDYYEGRTTVFPAITKTGYWNGITSHGSYVIKNDDLPKKIKNYYEIHVYGANSGAINSTGSLKRIFYLVPPKVEGPDGKVLSKRQV-FEVGANNQLISLSYQSPDWW----KRYKKSGLEKDLDVDAIYRGDFSSLKGTWRNGKGEV------LTINDDGSTDDGERISIGSTEKSRLPSVGMSSGNFGVSVYLFQIGVSNPYIENGHTSDTTRPRLAIGLNPGDFPTDAYYYRY |
| 1L6Z Chain:A ((1-203)) | ---------------------------------------------------------------------------------------------------EVTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQM--ITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPS-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L6Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5538 for 1333 contacts (-4.2/contact) +
2D Compatibility (PS) -20959 + (NN) -9664 + (LL) 7072
1D Compatibility (HY) -1600 + (ID) 1500
Total energy: -32189.0 ( -24.15 by residue)
QMean score : 0.143
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