Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIKWFSLVRITGLLLVLLYHFFKNSFPGGFVGVDIFFTFSGFLITALLIDEFSKTKKIDFVSFCRRRFYRIFPPLVLMVLVTIPFVFLVKSDFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHFYVLWGLTVWLLSKRSKDQKQLRGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREITGRFKKNIKNLTLKHNLIMMGSAFAGLMILTFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAVILTVVLSAVFSTLSFYIIEPFILGRKPKFLDYEFDLLPYKKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTNTNRTHTLAAGDAGALSDVTVIGDSVALRSSAA---------------FNKLLP-EVQL--DAAVSRNFSKSFDIFENRIQNKALSKIV--VLAVGVNSLDN----------YKTDLSQFIKSLP-KGHRLIIVTPYNAKN------------------MSQVTTVRDYELSLMKKYNYITVADWYKVATEHP----EIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK |
| 3MIL Chain:A ((2-212)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYEKFLLFGDSITEFAFNTRPIEDGKDQYALGAALVNEYTRKMDILQRGFKGYTSRWALKILPEILK--HESNIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIIIGPGLVDREKWEKEKSEEIALGYFRTNENFAIYSDALAKLANEE-KVPFVALNKAFQQEGGDAWQQ-LLTDGLHFSG-K--GYKIFHDELLKVIETFYPQYHP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MIL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78231 for 1215 contacts (-64.4/contact) +
2D Compatibility (PS) -16692 + (NN) -2610 + (LL) 35164
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -70419.0 ( -57.96 by residue)
QMean score : 0.550
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