Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISKPDKNKIRQKRHRRVRGKLSGTADRPRLNIFRSNTGIYAQVIDDVAGVTLASASTLDKEVS--NGTKTEQAVVVGKLVAERAVAKGISEVVFDRGGYLY-HGRVKALADSARENGLKF
3J7Y Chain:P ((74-171))
------------------------REFWHRLRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKH---NVVACESIGRVLAQRCLEAGINFMVYQPTPWEAASDSMKRLQSAMTEGGVVL
General information:
TITO was launched using:
RESULT:
Template:
3J7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36315 for 646 contacts (-56.2/contact) +
2D Compatibility (PS) -9761 + (NN) -5314 + (LL) 1264
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -55926.0 ( -86.57 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3J7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7Y-query.scw
PDB file :
Tito_Scwrl_3J7Y.pdb
: