Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNWNLDNFDNLHSSLAESAYNSRPNSFPELFETDSVTEVKFSQPSEDNKGQITQGGTNLPNDGIVYLQ--PDKSLKSIDENVKVRVPDVNGGYHSEHCVTNSYQKGY
3MJR Chain:C ((148-208))
------------------SVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQF----ELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLH
General information:
TITO was launched using:
RESULT:
Template:
3MJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11145 for 247 contacts (45.1/contact) +
2D Compatibility (PS) -6021 + (NN) -3220 + (LL) 736
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -1410.0 ( -5.71 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_3MJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MJR-query.scw
PDB file :
Tito_Scwrl_3MJR.pdb
: