Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------MKMTVYFDGNFWLGLIEYDDDGDYKVFRY-----FFG---------------KEPKDDDVFNFINHKLNDLIKKYEFVKTDISLKRTNEHKKSPKRMQREINREKRKPVVSTKAQLAMKTIHMSIKNERQL--SQKCKKNELRKHRYQLKQEKRYQKKKGH------------ |
1O3T Chain:A ((2-200)) | PTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGS--VAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 39551 for 800 contacts (49.4/contact) +
2D Compatibility (PS) -13953 + (NN) 3139 + (LL) 288
1D Compatibility (HY) -4800 + (ID) 850
Total energy: 23375.0 ( 29.22 by residue)
QMean score : 0.270
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