Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDP--ELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMISLTERWQAKRINFQLDSK---PYTVYSNSDLLMQVWINLLDNAIKYS-DDIVD--LRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQS--HNQQGNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS |
3DGE Chain:B ((14-246)) | ----------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVL-IIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DGE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107826 for 1593 contacts (-67.7/contact) +
2D Compatibility (PS) -23705 + (NN) -8212 + (LL) 12380
1D Compatibility (HY) -19200 + (ID) 3800
Total energy: -150363.0 ( -94.39 by residue)
QMean score : 0.558
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