Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKINTRDGQIELSDDVIATVVGGSATEIFGVVGMASKSAIKDNFQALLRKENYAKGVVVRSSEAGIAVDVYTVMSYGVKISEVSKNIQERVKFNLENQLGLSADMVNVYVQSIKVVGED
2OPA Chain:A ((13-48))
----------------------------------------------------------------------------------DEQKRNLVEKVTEAVKETTGASEEKIVVFIEEMRKDHYA
General information:
TITO was launched using:
RESULT:
Template:
2OPA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6959 for 146 contacts (-47.7/contact) +
2D Compatibility (PS) -3902 + (NN) -483 + (LL) 6176
1D Compatibility (HY) -400 + (ID) 350
Total energy: -5918.0 ( -40.53 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_2OPA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OPA-query.scw
PDB file :
Tito_Scwrl_2OPA.pdb
: