Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKITTSLFQEMVQAASTRLSKQAEYVNSLNVFPVPDGDTGTNMGMTMENGAKEVSDKPATTVGEVGQILSKGVLMGARGNSGVITSQLFRGFGQSIKDKEELTGQDLAHAFQNGVEVAYKAVMKPVEGTILTVSRGAATAALKKAEETDDAVEVMRATLKGAKRALAKTPEMLPVLKEVGVVDSGGQGLVFIYEGFLSALTGEYIASEDFKATPATMTEMVNAEHHKAVVGHVATEDIKYGYCTEVMVGLKQGPTYVKEFNYEEFQGYLSNLGDSLLVVNDDEIVKVHVHTEDPGLVMQEGLKYGSLVKVKVENMRNQHDAQMQKVEVEETVKETKEYGIIAVVAGDGLAEIFKSQGVDY----IISGG-------------------------QTMNPSTEDIVKAIEKV--NARNVIILPNNKNI---FMAAQSAADVVDIPAAVVETRTV--PQGFTSLLA---FDPAKSLETNVADMTNSLSDVISGSVTLAVRDTTIDGLEIHEN-----------DILGMVDGKILVSTPDME--KALKDTFDKMIDE----DSEIVTIYVGEDGKQALAETLSEYLEET-YEDVEVEIHQGDQPVYPYLMSVE |
| 2DT8 Chain:A ((1-263)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRITLVTDSTSDLPQDLRGRLGVRVVPLYVNLSGAIYRDWEEITPTEIFQKVREGAAFPTTSQPSPEDFARVYREALEEADHVLSLHISGKLSGTVQSAELAAQEFPGRVTVVDTQAASLGVGMMVLRAKELLEEGQSLEAVLAELERLRRDHFV-RFSVATLEFLKRGGRIGGAQAFLGTLLNLKPVLTLKEGRVEAAGRARGEKKAREEILKAFRAWAEGRKRIRAYFLYSGDE--DAVAALRQEVLASGLPVEEALVNELGAVIASHTGPGT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65813 for 1504 contacts (-43.8/contact) +
2D Compatibility (PS) -23046 + (NN) -12798 + (LL) 23188
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: -83869.0 ( -55.76 by residue)
QMean score : 0.382
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