Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------MLIIELLKALFLGVVEGVTEW-LPVSSTGHLILVQEFMKLNQSKSFVEMF-----NIVIQLGAIMAVIVIY--FKRL--NPFQP--GKSAREIRLTWQLWL---KV-----VIACIPSIL------IALPFDNWFEAHFNFMIPIAIALIFY--GFVFIWVE-----------KRNAHLKPQVTELASMSYKTAFLIG----------CFQVLSIVPGTSRSGATILG-----AIIIGTSRSVAADFTFFLAIPT-MFGYSGLKAV----KYFLDGNVLSLDQSLILLVASL---TAFVVSLYVIRFLTDYVKRHD---------FTIF--GKYRIVLGSLLILYWLVVHLF------- |
4IC4 Chain:A ((26-397)) | KSVTRRNDIPEAAASPPSLLSFLRKNVGKDLSSIAMPVTSNEPISILQLISETFEYAPLLTKATQRPDPITFVSAFAISFLSIYRDKTRTLRKPFNPLLAETFELIREDMGFRLISEKVSHRPPVFAFFAEHLDWECSYTVTPSQKFWGKSIELNNEGILRLKFKTTGELFEWTQPTTILKNLIAGERYMEPVNEFEVHSSKGDKSHILFDKAGMFSGRSEGFKVSIIPPPSSNRKKETLAGKWTQSLANETTHETIWEVGDLVSNPKKKYGFTKFTANLNEITEIEKGNLPPTDSRLRPDIRAYEEGNVDKAEEWKLKLEQLQRERRNKGQDVEPKYFEKVSKNEWKYITGPKSYWERRKKHDWSDISQLW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237889 for 1938 contacts (-122.7/contact) +
2D Compatibility (PS) -29265 + (NN) 3686 + (LL) 0
1D Compatibility (HY) -400 + (ID) 2550
Total energy: -266418.0 ( -137.47 by residue)
QMean score : 0.167
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