Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIATINKNDLIALGFSEGTSKRIIRQGKELLIARGFRVYQNKRIGTIPASIATELLGFDVQNSSLSRG
2Y9T Chain:A ((577-607))
--EHYSMDDLASLKIPEQFRHAIWKGILDHRQL-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Y9T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4359 for 165 contacts (-26.4/contact) +
2D Compatibility (PS) -3174 + (NN) 1676 + (LL) 2316
1D Compatibility (HY) -800 + (ID) 250
Total energy: -4591.0 ( -27.82 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_2Y9T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y9T-query.scw
PDB file :
Tito_Scwrl_2Y9T.pdb
: