Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTLIVNSHPDFSNPYSFTTILQEKFIELYNEHFPNHQLSILNLYDCVLPEITKEVLLSIWSKQRKGLELTA-DEIVQAKIS--KDLLEQFKSHHRIVFVSPMHNYNVTARAKTYIDNIFIAGETFKYTENGSVGLMTDDYRLLMLESAGSIYSKGQYSPYEFPVHYLKAIFKDFMAFDDFCVVRAEGTDILDRQVVLDKMNQDLREAFEAFYSKE
3W7A Chain:B ((5-199))
---LFITANPN-SAEGSFGMAVGEAFIEAYKNEHPQDEVVTIDLFNTTVPAIDADVFAA-WGKFAAGEGFEALTEVQQQKVAAMNTNLETFMNADRYVFVTPMWNFSYPPVVKAYLDNVAIAGKTFKYTENGPVGLL-EGKKALHIQATGGVYSEGAYAAVDFGRNHLKTVL-GFVGVNDTEYIAVEGMNANPEKA------QEIKEAAIANAREL
General information:
TITO was launched using:
RESULT:
Template:
3W7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109340 for 1387 contacts (-78.8/contact) +
2D Compatibility (PS) -20703 + (NN) -10079 + (LL) 1116
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -155106.0 ( -111.83 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3W7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W7A-query.scw
PDB file :
Tito_Scwrl_3W7A.pdb
: