Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSREYITLSKNIIKHLGGQNNINNVYHCQTRL---RFSLNDPTKVNLEQLKTLKE-----VKTVVISGGQHQIVIGTHVAKVFEEIN-------SLIETNSTTKTEQTKKAKAVSRIIDFVSGTFQPI-LPALSGA-GMIKALLALLLVFKILTPLSQTYILLNLFADGVFYFLPILIAITAAQKLKANPILALGTVVMLLHPNWANLVASGKPVSLFHTIPFTLTNYASSVIPIILIICVQAYIEKYLNQIIPKSLRLVLVPMLIFLSMGILSFSILGPMGTIAGQYLAVIFTFLSKYASWAPAFLVGAFAPILIMFGVHSGIAALGITQLTKLGFDSIFGPGMLCSNIAQATAGTVVTLITKEKKLKEIAGPAAITAYMGITEPILYGVNLPKRYPLIASLIGGGLGGLYAGIMNAHRFAVGSSGLPGLF------LYISHTSTHLFITMLIAVIITVSTTAILTFILAQYYEKQVSIRQRD---------- |
| 4C1N Chain:A ((1-442)) | -GLTGLEIYKHLPKKNCKECGQPTCLAFAMQIAAGKAGLDACPYVSDEAKELLESASAPPVALIKVGKGEKVLEIGHETVLFRHDKRFEHPCGLAILVEDTLSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGSSQDAATFAKAVATAREVTDLP--FILIGT---------PEQLAAALETEGANNPLLYAAT-----ADNYEQMVELAKK----YNVPLTVSAKGLDALAELVQKITALGYKNLILDPQPENISEGLFYQTQIRRLAIKK--LFRPFGYPT---IAFALDENPYQAVMEASVYIAKYAGIIVL----NTVEPADILPLITLRLNIYTDPQ---------------KPIAVEPKVYEILNP-------GPDAPVFITTNFSLTYFCVAGDVEGARIPAYILPVDTDGTSVLTAWAAGKFTPEKIAQFLKESGIAEKVNHRKAILPGGVAVLSGKLQELSGWEILVGPRESSGINSFIKQRW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -309601 for 3241 contacts (-95.5/contact) +
2D Compatibility (PS) -42836 + (NN) -7711 + (LL) 5280
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -367668.0 ( -113.44 by residue)
QMean score : 0.262
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