Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLLFMGTPDFSATVLKGILADGKYDVLAVVTQPDRAVGRKKEIKMTPVKEVALENNIPVYQPEKLSGSPELEQLMTLGADGIVTAAFGQFLPTKLLE-SVGFAINVHASLLPKYRGGAPIHYAIINGEKEAGVTIMEMVAKMDAGDMVSKASVEITDEDNVGTMFDRLAVVGRDLLLDTLPGYLSGDIKPIPQNEEEVSFSPNISPDEERIDWNKSSRDIFNHVRGMY-PWPVAHTLLEGNRFKLY--EVTMSEGKGSPGQVIAKTKNSLTVATGDGAIELKSVQPAGKPRMDIKDFLNGVGRNLEIGDKFGE |
| 4WKG Chain:F ((2-280)) | --KTVVFAYHDMGCLGIEALLAAG-YEISAIFTHTDNP-------FYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHASKAQPGSVISVA--PLLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLVQGSRLRRTR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159745 for 2156 contacts (-74.1/contact) +
2D Compatibility (PS) -29189 + (NN) -9630 + (LL) 864
1D Compatibility (HY) -20000 + (ID) 4500
Total energy: -222200.0 ( -103.06 by residue)
QMean score : 0.544
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