Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKYSIRGENIEVTEAIREYVETKLSKVEKYFNEAQELDTRVNLKVYREKTAKVEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYREKIPASQVFTTEFEAEPDEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLYKREDGELGLIEAKGN
1IMU Chain:A ((1-99))
-MTLNITSKQMDITPAIREHLEERLAKLGKWQTQLISPHFVLNKVPN---GFSVEASIGTPLGNLLASATSDDMYKAINEVEEKLERQLNKLQHKSESRRADERLKDSFEN-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IMU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30360 for 718 contacts (-42.3/contact) +
2D Compatibility (PS) -10483 + (NN) -342 + (LL) 6076
1D Compatibility (HY) -2000 + (ID) 1400
Total energy: -38509.0 ( -53.63 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_1IMU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IMU-query.scw
PDB file :
Tito_Scwrl_1IMU.pdb
: