Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYLQQHDI-DSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQ--DLASKISQKLYKKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKLSKKYDQYELKQRIINALMRKGYQYEDIKSALREYL |
3C1D Chain:A ((10-161)) | -----------------------------------------------------AYARLLDRAVRILAVRDHSEQELRRKLAAP--ATAEDYERVIAWCHEHGYLDDSRFVARFIASRSR-KGYGPARIRQELNQKGISREATEKAMREADIDWAALARDQATRKYGEP--LPTVFSEKVKIQRFLLYRGYLMEDIQDIW-------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -25810 for 940 contacts (-27.5/contact) +
2D Compatibility (PS) -14287 + (NN) -3442 + (LL) 10804
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -38385.0 ( -40.84 by residue)
QMean score : 0.561
|
|
|