Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVSALLKFDFSVVRHNMAIKLNNNFLIIMGTSFLLLLAYHIKKEGKEVLSSLFVISNFFDNSTLFFVIIVVMRVVAGTFGGRPLKTLDGKTTRPTTDKVKGAIFNMIGPFFEGGRVLDLFSGSGSLAIEAISRGMDQAVLVE-KDRRAQVVIQENIAMTKSPEQFQLLKMEA-NRALEQLTGQFDLVLLDPPYAKEEIVKQIQIMDSKGLLGDDIMIVCETDKSVDLPEEIASFGIWKQKIYGISKVTVYVR--- |
2FPO Chain:D ((12-194)) | ---------------------------------------------------------------------GQIRIIGGQWRGRKLPV----PDSPGTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATL--KAGNARVVNSNAMSFLAQK-GTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96696 for 1414 contacts (-68.4/contact) +
2D Compatibility (PS) -19067 + (NN) -7995 + (LL) 6784
1D Compatibility (HY) -12000 + (ID) 2300
Total energy: -131274.0 ( -92.84 by residue)
QMean score : 0.451
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