Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVYENKEELKKEISKTFEKYIMEFNNIPENLKDKRIDEVDRTPAENLSYQVGWTNL-VLKWEEDERKGLQ-VKTPSDKFKWNQLGELYQWFTDTYAHLSLQELKAKLNENINSIYAMIDLL--SEEELFEAHMRKWADEATKTATWEVYKFIHVNTVAPFGTFRTKIRKWKKIVL |
| 2RD9 Chain:A ((20-175)) | --MNFQMNEAIQLLERTPKTLEVFLEGLSDSWHQCNEGYETWTVYEVVVHLIEAEKTNWIPRLRFILQEGEHKPFPA-------FDRFSHL--NQSNAVPISERFKEFQQLRKENLNTLRSLVQSEADLERTGAHPAFG------VVKVRELLSA-WVVHDLTHIAQIVRSMAKRY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6374 for 1014 contacts (6.3/contact) +
2D Compatibility (PS) -15648 + (NN) -3004 + (LL) 1352
1D Compatibility (HY) 400 + (ID) 700
Total energy: -11226.0 ( -11.07 by residue)
QMean score : 0.368
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