Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDTLKLYFVCGTVDCSRKNILTVVEEALQAGITLFQFREKGFTALQGKEKIAMAKQLQILCKQYQVPFIIDDDIDLVELIDADGLHIGQNDLPVDEARRRLPDKIIGLSVSTMAEYQKSQLSVVDYIGIGPFNPTQSKADAKPAVGNRTTKAVREINQDIPIVAIGGITSDFVHDIIESGADGIAVISAISKANHIVDATRQLRYEVEKALVNRQKRSDVIK
1G67 Chain:B ((12-225))
MKELLSVYFIMGS-NNTKADPVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAIGDMILGVAAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQTYKTGR--------
General information:
TITO was launched using:
RESULT:
Template:
1G67.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149803 for 1837 contacts (-81.5/contact) +
2D Compatibility (PS) -24145 + (NN) -16293 + (LL) 832
1D Compatibility (HY) -10400 + (ID) 4450
Total energy: -204259.0 ( -111.19 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_1G67.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G67-query.scw
PDB file :
Tito_Scwrl_1G67.pdb
: