Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNIELKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSEGYKDFSEIAIYGNTEEPISPCGACRQVMVEFFNKNAKVTLIAKNGKTVETTVGELLPYSFVDLK
1UX0 Chain:B ((1-125))
MNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAEQTALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSED
General information:
TITO was launched using:
RESULT:
Template:
1UX0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53800 for 1018 contacts (-52.8/contact) +
2D Compatibility (PS) -13752 + (NN) -5848 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 3300
Total energy: -86300.0 ( -84.77 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1UX0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UX0-query.scw
PDB file :
Tito_Scwrl_1UX0.pdb
: