Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MKKQKLLLLIGGLLIMIMMTACKDSKIPENRTKEEYQAEQNFKLFFEFLAQKYKDLNK---IQKYLLLVSDSGDALDLEYFYSIQDLKKNKDLGK---------FETRKSQIEKPGG---------------YNELENKEVPFEYFKNN--IVYPKGK----PNITFDDFIIGAMD------------TKELKKLKVKSYLLKHPETELKDITYEL---PTQSKLIKK-------------------------- |
| 1D9E Chain:A ((1-284)) | MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNEKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQRAQVAELARAGMAVGLAGLFIEAHPDPEPSALPLAKLEPFLKQMKAIDDLVKGFEELDTSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13448 for 1196 contacts (11.2/contact) +
2D Compatibility (PS) -18105 + (NN) 9860 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -1197.0 ( -1.00 by residue)
QMean score : 0.169
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