Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEMIKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLEALNK |
2RSM Chain:A ((4-110)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGKWGLRLQEKPALLFPG-MAASTVQVAGRKDYP-ALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKIARKVLQEKVDVFYNSGPSSG--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15867 for 520 contacts (-30.5/contact) +
2D Compatibility (PS) -11529 + (NN) -3614 + (LL) 18264
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -16446.0 ( -31.63 by residue)
QMean score : 0.462
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