Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSMDWETFLDPY-------IQTVGELKIKLRGIRKQFRKQNRHSPIEFVTGRVKSVESIQEKMVLRGISEENLAQDLQDIAGLRIMV------QFVDDVDEVLALLRKRHDMTVVQERDYI-----------THM-KSSGYRSYHVVVEY-------PVDTIDGQKKVLAEIQIRTLAMNFWATIEHSLNYKYQGDFPEEIKQRLEKT-----AKIALELDEEMRKIRE-DIREAQLLFDPLNRKLSDGVGNSDDTDEFYR |
| 4K92 Chain:A ((17-259)) | -AVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSD-DKHD----WEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSK---SVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQS--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K92.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26705 for 1486 contacts (-18.0/contact) +
2D Compatibility (PS) -22306 + (NN) -13595 + (LL) 1364
1D Compatibility (HY) -10000 + (ID) 1750
Total energy: -72992.0 ( -49.12 by residue)
QMean score : 0.303
|
|
|