Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MGDKPISFRDKDGNFVSAADVWNAE------KLEELFNTLNPNRKLRLEREKLAKEKG-------------------------------------------- |
| 4KQD Chain:A ((3-116)) | IDLLENLTAVIQDYPNPACIRDETGKFIFCNTLFHESFLTQDQSAEKWLLSQRDFCELISVTEMEAYRNEHTHLNLVEDVFIQNRFWTISVQSFLNGHRNIILWQFYDAAHVRH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 232 for 241 contacts (1.0/contact) +
2D Compatibility (PS) -5885 + (NN) -5637 + (LL) 0
1D Compatibility (HY) -800 + (ID) 450
Total energy: -12540.0 ( -52.03 by residue)
QMean score : 0.568
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