Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHRSFLEENYLEAIYILQQRNESVRSIDVAEYLSVAKSSVNSAVNKLLTQQYITFEDDKIIRMTAEGEKIAEFVYEKHLYLKKLLCKMGIDETEADEIACLLEHILKEDSFKKIKKFVQDKKII
2F5D Chain:B ((7-118))
-------EDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIY----GLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEED
General information:
TITO was launched using:
RESULT:
Template:
2F5D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67915 for 724 contacts (-93.8/contact) +
2D Compatibility (PS) -11152 + (NN) -4546 + (LL) 752
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -92661.0 ( -127.98 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_2F5D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F5D-query.scw
PDB file :
Tito_Scwrl_2F5D.pdb
: