Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIIIVAHGN-FPDGILSSLELIAGHQEYVVGINFIAGMSSNDVRVALQREVID---FKEILVLTDLLGGTPFNVSSALSVEYTDKKIKVLSGLNLSMLMEAVLSRTMFEHVDDLVDKVITSSHEGIVDFSTCLATQTAEATFEGGI
3GX1 Chain:A ((4-126))
QVEVIVMMHGRSTATSMVETVQELLSIE-SGIALDMPLTVEVKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILTEE-LGIRTKTVTMVSTPVVLEAMRKASLGRGLEDIYQSCEQLFENK---------------------
General information:
TITO was launched using:
RESULT:
Template:
3GX1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102059 for 937 contacts (-108.9/contact) +
2D Compatibility (PS) -12974 + (NN) -4802 + (LL) 1816
1D Compatibility (HY) -8400 + (ID) 800
Total energy: -127219.0 ( -135.77 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_3GX1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GX1-query.scw
PDB file :
Tito_Scwrl_3GX1.pdb
: