Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFDFFKKKVVKVCLVIFGIVLVSLLSLGFFYFS-KGQVLSRFVAARSRTSGQAFDNIKEYMVWSDTGESITNDEANY-ANFEPLSKSEARKLGQEIKEGNKNDSMYLKRVGSRLGIFPDYRIA--NKPMSLTLKTNVPKLDVLLNQKKVATSNSDHFSVTVERLPRTHYTASLEGTSDGKEIKLKKDYDGKNQTIDLSVAFKSFTVTSNLMDGNLY-FGDNRIAKLKDGSYSVENYPVTDGSKAYIKK-VFNDGEIT-SHKQKLISIADNQTIKLDVDGLLNEKEAGQKLITAFNQLILYVSTGQDPQTLGTVFEK-GAENDFYKG-LKESIKAKFVTDNRKASHFTIPNIVLNKMTQVGKESYQVNF-AADYDFNYDKSTDPDKKTYGHIIQNLTGNFIMKKSGNSYLISNDGKKDITVAKETNKVKADPVSIFPENLVGSWKGEVEDGTVTMTFDKDGKVTQKKVYKDSKSK-ESNH-SAKVTKLEDKGNGLYLYQYESG-TDTTTFVTGGIGG--LKVKYAYGIKIEGNKIIPVIWQTSSDGEFDYHKPLLSKPLTKQ |
| 4R7F Chain:A ((2-398)) | QVKFFTDVNSKQIKTLQVKVAGELISEPYIALGGEEQIEINFDGLGSGYTRYAYNVVHCNADWTQSQLS----PIEYMNGFQ----------GTTIDD-------FANSIGTTTQ-YSNYRLLLPNDDVQFKVSGNYA-IQVYNEDTPDQIIFTACFSVVE---PVVNISASVSGNTD-------IDTNQSHQQVSFNINNKNFPITYPQTDLKIFVYQDNR----------------RDNAVTDLQPMSILENQISYTYNRNLIFPAGNE------------------------------------------YRRMEFLSNKYNGMHVENISFH-------------------------NPYYNVELMT---DYRRDKGTYQYD-------QDQDGRFFIRCSDC-----NDPDTEADYYIVHFTLACDPLP---------------DGSVYLNGELFNNVL------DEKSKMGYNFETKQYEKAVLLKQGSYNYQYLFVPTGSSVGQTGPIEGNYYQTQNEYSIYVYYRPM---------GARYD---RLIGVTTVRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 107417 for 2994 contacts (35.9/contact) +
2D Compatibility (PS) -39851 + (NN) 542 + (LL) 10444
1D Compatibility (HY) -13600 + (ID) 4350
Total energy: 60602.0 ( 20.24 by residue)
QMean score : 0.130
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