Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLLELVNLHKTFEKGTVNENHVLRGLDLTIEDGDFISVIGGNGAGKSTLLNCIAGLIPIDQGAITLDN---QSITKDSVEKRSKD-ISRVFQDPRMGTATNLTIEENMAIAHKRGNKRHIFRQSVTDDDRQLFKKSLSQLGLG-LENRMKTDAAF-LSGGQRQALTLAMATLVRPKLLLLDEHTAALDPKTSDMVMELTQKVIEEQRLTALMITHNMEHAIAYGNRLVMLYHGKIVVDVKGEAKRNLTVAELMELFHKNSGQQLIDDALVLG |
3TIF Chain:B ((1-223)) | --MVKLKNVTKTYKMGE-EIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQ--QFNLIPLLTALENVELPLI-----FKYRGAMSGEERR--KRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVA-RFGERIIYLKDGEVEREEKLRGF---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118506 for 1744 contacts (-68.0/contact) +
2D Compatibility (PS) -23117 + (NN) -3132 + (LL) 2936
1D Compatibility (HY) -16800 + (ID) 3650
Total energy: -162269.0 ( -93.04 by residue)
QMean score : 0.568
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