Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIITVGKLKEKYLKEGVAEYQKRLNRFSKIETIELADEKTPDKASISENQRILDIEGERILSKIGERDYVIGLAIEGKQLPSESFSHLIDQKMISGYSTITFVIGGSLGLSQKVKKR-----ADYLMSFGLLTLPH-QLMKLVLMEQIYRAFMIRQGTPYHK
3QUV Chain:A ((81-158))
---------------------------------------------------------------------ETLLVVPTPAGYPFTQ-ETAWQWST-----EDHLVIACGRYEGIDQRVADDAATRMRVREVSIGDYVLNGGEAAALVIIEAVLRLVPGVLGNASLL
General information:
TITO was launched using:
RESULT:
Template:
3QUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60306 for 458 contacts (-131.7/contact) +
2D Compatibility (PS) -7908 + (NN) -5350 + (LL) 6000
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -71364.0 ( -155.82 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_3QUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUV-query.scw
PDB file :
Tito_Scwrl_3QUV.pdb
: