Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDDGVSFTGSDSDISIESFIPKEEGDKEIVTIEQPGSIVLQARFFSEIVKKLPMA-TVEIEVQNQYLTI-IRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIRQTVFAVSTSETRPILTGVNWKVEQSELLCTATDSHRLALRKAKLDIPEDRSYNVVIPGKSLTELSKILDDNQELVDIVITETQVLFKAKNVLFFSRLLDGNYPDTTSLIPQDSKTEIIVNTKEFLQAIDRASLLAREGRNNVVKLSAKPAESIEISSNSPEIGKVVEAIVADQIEGEELNISFSPKYMLDALKVLEGAEIRVSFTGAMRPFLIRTPNDETIVQLILPVRTY |
| 4K3L Chain:A ((1-365)) | MKFTVEREHLLKPLQQVS---------PILGNLLLQVADGTLSLTGTDLEMEMVARVALV-------QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE--RMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQS-LPSHSVIVPRKGVIELMRMLD---NPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFR-GVRLYVS-ENQLKITANNPEQEEAEEILDV-TYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231838 for 2788 contacts (-83.2/contact) +
2D Compatibility (PS) -38290 + (NN) -15125 + (LL) 1356
1D Compatibility (HY) -25200 + (ID) 4750
Total energy: -313847.0 ( -112.57 by residue)
QMean score : 0.571
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