Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIKKCKQLLMSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTKMMTEYLLLEAIDQGKVKWDQTYT--PDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAIYSANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVNEESEVSAKDMAVLADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYKKATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLNAKGNLHTGRFDETKKMFDYAFDNF-SMKEIYAEGDQVKGHKTISVDKGKEKEVGIVTNKAFSLPVKNGEEKNYKAKVTLNKDNLTAPVKKGTKVGKLTAEYTGDEKDYGFLNSDLAGVDLVTKENVEKANWFVLTMRSIGGFFAGIWGSIVDTVTGWF
3ITB Chain:C ((11-351))-------------------------------------VDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTF--------QTVHGLDAPG------QFSTARDMALLGKALIHDVPE-----EYAIHKEKEFTFNKIRQPNRNRLLWS-----SNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRI--RFNESEKLLTWGFRFFETVTPIKPDATFV----TQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI---------DFQLNGKSIEQRPLIVMENVEEG-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ITB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87524 for 2931 contacts (-29.9/contact) +
2D Compatibility (PS) -36529 + (NN) -12405 + (LL) 7308
1D Compatibility (HY) -23200 + (ID) 6200
Total energy: -158550.0 ( -54.09 by residue)
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_3ITB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ITB-query.scw
PDB file : Tito_Scwrl_3ITB.pdb: