Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFLRKKTLRREFDEKLTEQLFKQKEEWNRQKKLVEKSLEPSAEVLYELKVAEAKYFFYLREAKQRNLKISRWK
4A54 Chain:B ((240-291))
GATTKEKNISVDVDADASSQLLSLLKSSTAPSDLAT----PQPSTFPQPPVESHSS------------------
General information:
TITO was launched using:
RESULT:
Template:
4A54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9610 for 167 contacts (57.5/contact) +
2D Compatibility (PS) -5202 + (NN) 1849 + (LL) 2136
1D Compatibility (HY) 1200 + (ID) 350
Total energy: 9243.0 ( 55.35 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_4A54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A54-query.scw
PDB file :
Tito_Scwrl_4A54.pdb
: