Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQEALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGPCGRMLC--------CSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNILERVLQVELINREKVIEYTWEELLEEGVVSAQTTD |
1IW4 Chain:A ((1-55)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------AHMDCTEFNPLCRCNKMLGDLICAVIGDAKEEHRN--------MCA--LCCEHPGGFEYSNGPCE--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3773 for 286 contacts (13.2/contact) +
2D Compatibility (PS) -4136 + (NN) 4663 + (LL) 17988
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 18788.0 ( 65.69 by residue)
QMean score : -0.042
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