Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRLAQKTRGVIILTDPDFPGEKIRKTISEAVP----GCKHAFLPKHLAKPKNKRGIGVEHASVESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGPAAKCRRERLGDLLKIGYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE |
4EDG Chain:A ((152-233)) | --LDEIVLLEGFMDVIKSDTAGLKNVVATMGTQLSDEHITFIRKL--TSNITLMFDGDFAGSEATLKTGQHLLQQGLNVFVIQLPS-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29334 for 490 contacts (-59.9/contact) +
2D Compatibility (PS) -8694 + (NN) -2682 + (LL) 7764
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -36696.0 ( -74.89 by residue)
QMean score : 0.407
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