Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIGDIQLKNRVVLAPMAGVCNSAFRLTVKEFGAGLVCAE---MVSDKAI-----------LYNNART-MGMLYIDEREKPLSLQIFGGKKETLVE-AAKFVDQNTTADIIDINMGCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAV--NKPVTVKMRMGWDE-DHIFAVKNAQAVERAGGKAVALHGRTRVQMYEGTA-NWDIIKEVKQSVSIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKLKEEPQVREKMAVCKLHLDRLIDLKGENVAVREMRKHAAWYLKGVKGNANVRNEINHCETREEFVQLLDAFTVEVEAKELQNAKVG |
| 4YCO Chain:B ((8-247)) | -----------RVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTL--------VRVQLLGQFPQWLAENAARAVELGSWG--VDLNCGAPS----GSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEI--ADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP-NLSRVVKYNE----------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -157739 for 1848 contacts (-85.4/contact) +
2D Compatibility (PS) -23327 + (NN) -7718 + (LL) 9276
1D Compatibility (HY) -14800 + (ID) 4300
Total energy: -198608.0 ( -107.47 by residue)
QMean score : 0.534
|
|
|