Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------------------------------------------------------MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKLSNKPEKG-HVAKAETAPKRFVKELRGVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSR-YHRRPGSMGPVDPNRVFKGKLLPGRMGGEQITVQNLEIVKVD----------------AERNLLLIKGNVPGAKKSLITVKSAVKSK-------------------
1JJ2 Chain:B ((1-337))PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDH------------DPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG


General information:
TITO was launched using:
RESULT:

Template: 1JJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 25265 for 1119 contacts (22.6/contact) +
2D Compatibility (PS) -21343 + (NN) -9321 + (LL) 800
1D Compatibility (HY) -2000 + (ID) 2550
Total energy: -9149.0 ( -8.18 by residue)
QMean score : 0.239

(partial model without unconserved sides chains):
PDB file : Tito_1JJ2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JJ2-query.scw
PDB file : Tito_Scwrl_1JJ2.pdb: