Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLLTPTSVVLGVLLSQFLNGYEWAVPWIFAFITFAGSLSANFQSLRHALSHPLPMILALFVLHIFMPLFAWG--SGHLIFKGDPLTITGLTLAVVIPTGITSLIWAAMYKGNVGL-TLSIILVDTVLSPLIVPLSLSLLAGA---QVHMDVW---GMMKGLIVMVVIPS-------------FLGMLFN-QMSSPERTAFVSSALSPFSKLCLMAVIAINSSAIAPYFKSIDLRFAGIA-----------------VTVFFI-ALT----GYAAAWLIGKMMKRRQEEIVSLIFTGGMRNISAGAVLAVTFFPSQVAV---PVVIG----------------MLFQQILAALFGYML---------NRFELK-PMLQKA--------------------------- |
| 4QHW Chain:A ((2-401)) | ----QPQQVVVGVSGNGYVTRQQDGARITQRGVTHWTNPKS-IVSIYFYLHQPTTADLSLYAKGHSEIKVSYGKKGFKVNLQSNDFTKVPVGSIDIRQAGYVRIDLQGVSKSGEGFGEIKQLIADNVTGKSNYVKDFSDYWGRRGPSVHLGYALPEGDTEWFYNEITVPKEGETMHSYYMAAGFGEGYFGMQYNSPTERRILFSVWSPFDTQNPKEIP--DDQKIKLLRQGKDVHIGEFGNEGSGGQSYLKYPWKAGNTYKFLMQIRPDGNGNTTYTAYFYATDEKEWKLIASFLRPKTNTWYKRPHSFLENFSPEQGYLSREVFFGNQWARSKEGKWSRLTDATFTHDATASAQVRLDYQGGNTKDNRFYLKMGGFFNESVPMGTKFYCKPTGKEPEIDWEALKQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -329970 for 2165 contacts (-152.4/contact) +
2D Compatibility (PS) -31944 + (NN) 6981 + (LL) 688
1D Compatibility (HY) -2400 + (ID) 2450
Total energy: -359095.0 ( -165.86 by residue)
QMean score : 0.118
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