Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDKTYEVTVPTDKIAITGSVESMEDAKLLDVHPQGAISF-SG-KFPDMFKDITDKAEPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKA-AKAQELSSLEKLSEMNPDHIFVQFSDDENAD-KPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPL--AQGGTAWSKVRFLKAAAEKLTQN |
| 3TNY Chain:A ((17-296)) | ------------------------------------EVVTVEHAMGKTEVPANPKRV-VILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKFYAKALNKEKEGQKVVADYESRMKDLKGKLGDKVNQEISM-VRFMPGDVRIYHGDTFSGV-ILKELGFKRPGDQNKDDFAERNVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVIAANLL--LDDIEKRFV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36908 for 2304 contacts (-16.0/contact) +
2D Compatibility (PS) -29872 + (NN) -16205 + (LL) 3548
1D Compatibility (HY) -10800 + (ID) 3550
Total energy: -93787.0 ( -40.71 by residue)
QMean score : 0.467
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