Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQDISLSFYKPEHLPELQSFTLTNDDKRFTSLPKEVLSQALGIQDRYPVVILKDDLPVGFFILHASKETLASYSNNPFALLLSSLSLTAVHHGKGYAKKAMLLLPAFVSGYFPW-CDEIILAVNHLNIRAKHLYMKSGFLDKGRRRI----GPLGEQLILHHFL
2OB0 Chain:A ((4-155))
-GSRIELGDVTPHNIKQLKRLNQVIFPVSY---NDKFYKDVLE-VGELAKLAYFNDIAVGAVCCRVD-HS-----QNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKD--GTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNL
General information:
TITO was launched using:
RESULT:
Template:
2OB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101208 for 1087 contacts (-93.1/contact) +
2D Compatibility (PS) -15862 + (NN) -3658 + (LL) 1024
1D Compatibility (HY) -8000 + (ID) 1300
Total energy: -129004.0 ( -118.68 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_2OB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OB0-query.scw
PDB file :
Tito_Scwrl_2OB0.pdb
: